PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN37435.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 328aa    MW: 36389.4 Da    PI: 6.3745
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN37435.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.4e-1299150155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++++h  +Er+RR+++N+ +  Lr+l+P+    + k+ + a+i   +v+YI+++q
  KHN37435.1  99 QKVSHITVERNRRKQMNENLLVLRSLMPSF---YVKRGDQASIIGGVVDYINEMQ 150
                 6899*************************9...9******************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.56E-1296154No hitNo description
PROSITE profilePS5088813.62498149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-1599165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-999150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-12100161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.0E-8104155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MDESLCDIFK DTEFGDTHFG GGDLFSILES IDDLKDFPPT NNNEAVIGRT SKENEQNSRM  60
VSQKVLISSS APQDSETEHE ISPKSKRQKL RSTSPEELQK VSHITVERNR RKQMNENLLV  120
LRSLMPSFYV KRGDQASIIG GVVDYINEMQ QLLQCLEAKK QRKVYIEVLS PRLVSSPRPS  180
PLSPRKPPLS PRISLPISPR TPQQPSSPYK PRLQPGYLSP TIANSPTSSA SSSINDNINE  240
LVANSKSIIA DVEVKFSGPH VLLKTVSPPI PGQAMRIISA LEDLALEILH VNISTADETM  300
LNSFTIKIGI ECQLSAEELA QQIQQTFC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003541629.20.0PREDICTED: transcription factor SPEECHLESS-like
SwissprotQ700C71e-103SPCH_ARATH; Transcription factor SPEECHLESS
TrEMBLA0A0B2RWK20.0A0A0B2RWK2_GLYSO; Transcription factor SPEECHLESS
TrEMBLK7LXZ70.0K7LXZ7_SOYBN; Uncharacterized protein
STRINGGLYMA13G08740.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36863463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.14e-51bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]